Cold-water coral DNA sequences from Eastern Canada: Part 1
Cold-water corals are conspicuous in the waters off Eastern Canada. Despite that, there are few DNA sequence records from specimens collected in the region available in GenBank, and not all species recorded in the region have sequence data regardless of geographic origin. This can limit the use of eDNA techniques to detect and identify corals. Our objective was to sequence and publish sequences for two octocoral DNA barcoding markers: CO1 and MutS. We sequenced and deposited 36 sequences to GenBank from 19 specimens representing three sea pen taxa (Octocorallia: Pennatuloidea): Distichoptilum gracile, Pennatula aculeata, and Protoptilum carpenteri. Identification of all specimens was confirmed by B. M. Neves before submission. Specimens and DNA tissues were donated to the Canadian Museum of Nature, where they are currently stored. This publication is part 1 of a series of GenBank submissions by our lab. Specimens were collected from across the Northwest Atlantic and originate from depths ranging between 200-1924 meters. Specimens were collected as part of research vessel multispecies trawl surveys or remotely operated vehicle (ROV ROPOS) surveys. DNA was isolated and purified…
- Publisher
- Fisheries and Oceans Canada
- Resources
- 7
- Catalogue metadata updated
- 2026-03-24
Data overview
- Formats
- CSV, ESRI REST, FGDB/GDB, TXT
- File languages
- English, French
- Available actions
- 2 loadable resources
Official sources and licences
Resources
- Cold-water coral DNA sequences – Metadata_EN.csv (English) CSV
- Cold-water coral DNA sequences – Metadata_FR.csv (French) CSV
- Cold-water coral DNA sequences - GDB (English, French, FGDB/GDB) FGDB/GDB
- Cold-water coral DNA sequences - Web Map Service - EN (English, ESRI REST) ESRI REST
- Cold-water coral DNA sequences - Web Service - FR (French, ESRI REST) ESRI REST
- GenBank sequences OQ420359-OQ420377_aligned_muts.fas (English, French, TXT) TXT
- GenBank sequences OQ569768-OQ569784_aligned_cox1.fas (English, French, TXT) TXT